STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHA48427.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (68 aa)    
Predicted Functional Partners:
OHA48426.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.642
OHA48424.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.625
OHA48425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.625
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.570
OHA48428.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
OHA48429.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
OHA48430.1
Antitoxin HicB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.415
Your Current Organism:
Terrybacteria bacterium RIFCSPHIGHO201FULL4817
NCBI taxonomy Id: 1802362
Other names: C. Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_48_17, Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_48_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.