STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGL78148.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (152 aa)    
Predicted Functional Partners:
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
       0.790
OGL78371.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.788
lysS
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.777
OGL78145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DegT/DnrJ/EryC1 family.
       0.774
OGL78144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.769
OGL78762.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.768
OGL78146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.768
OGL79653.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.761
OGL78143.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.738
OGL78281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.737
Your Current Organism:
Uhrbacteria bacterium RIFCSPHIGHO212FULL6025
NCBI taxonomy Id: 1802399
Other names: C. Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_60_25, Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_12_FULL_60_25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.