STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGL94700.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (387 aa)    
Predicted Functional Partners:
OGL95401.1
Holliday junction DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.997
A2348_04145
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.884
OGL94697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGL94698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGL94699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGL95960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.711
uvrA
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.680
OGL95428.1
Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.680
OGL94703.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.630
OGL94711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.554
Your Current Organism:
Uhrbacteria bacterium RIFOXYB12FULL5810
NCBI taxonomy Id: 1802418
Other names: C. Uhrbacteria bacterium RIFOXYB12_FULL_58_10, Candidatus Uhrbacteria bacterium RIFOXYB12_FULL_58_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.