STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGM60587.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (411 aa)    
Predicted Functional Partners:
OGM60584.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.857
OGM59141.1
threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.
    
 0.856
A3A75_00290
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
  
 
 0.832
OGM60570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.816
OGM60099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.815
OGM60039.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.812
OGM59576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.797
OGM60586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.791
OGM60098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.781
A3A75_05000
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.778
Your Current Organism:
Woesebacteria bacterium RIFCSPLOWO201FULL3910
NCBI taxonomy Id: 1802516
Other names: C. Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_10, Candidatus Woesebacteria bacterium RIFCSPLOWO2_01_FULL_39_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.