STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC13714.1lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
OGC13938.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.983
OGC13674.1
glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
OGC10888.1
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
OGC10795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
OGC10379.1
methionine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.935
OGC10572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.894
OGC13847.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.893
OGC10865.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.891
OGC13954.1
phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.858
OGC10456.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.840
Your Current Organism:
candidate division WOR1 bacterium RIFCSPHIGHO202FULL5326
NCBI taxonomy Id: 1802566
Other names: c. division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26, candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.