Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OGC10299.1 | OGC12816.1 | A3D23_06735 | A3D23_03675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| OGC10509.1 | OGC12689.1 | A3D23_04140 | A3D23_02995 | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| OGC10509.1 | OGC12815.1 | A3D23_04140 | A3D23_03670 | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
| OGC10509.1 | OGC12816.1 | A3D23_04140 | A3D23_03675 | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.847 |
| OGC10509.1 | OGC13778.1 | A3D23_04140 | A3D23_01745 | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase (NADPH), homotetrameric; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.618 |
| OGC10509.1 | gltD | A3D23_04140 | A3D23_03680 | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.618 |
| OGC12579.1 | OGC12816.1 | A3D23_07010 | A3D23_03675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| OGC12605.1 | OGC12816.1 | A3D23_02540 | A3D23_03675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| OGC12689.1 | OGC10509.1 | A3D23_02995 | A3D23_04140 | Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| OGC12689.1 | OGC12816.1 | A3D23_02995 | A3D23_03675 | Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.934 |
| OGC12689.1 | OGC13778.1 | A3D23_02995 | A3D23_01745 | Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase (NADPH), homotetrameric; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.572 |
| OGC12689.1 | gltD | A3D23_02995 | A3D23_03680 | Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.572 |
| OGC12815.1 | OGC10509.1 | A3D23_03670 | A3D23_04140 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.718 |
| OGC12815.1 | OGC12816.1 | A3D23_03670 | A3D23_03675 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| OGC12815.1 | OGC13778.1 | A3D23_03670 | A3D23_01745 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase (NADPH), homotetrameric; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| OGC12815.1 | gltD | A3D23_03670 | A3D23_03680 | Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| OGC12816.1 | OGC10299.1 | A3D23_03675 | A3D23_06735 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.874 |
| OGC12816.1 | OGC10509.1 | A3D23_03675 | A3D23_04140 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.847 |
| OGC12816.1 | OGC12579.1 | A3D23_03675 | A3D23_07010 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.874 |
| OGC12816.1 | OGC12605.1 | A3D23_03675 | A3D23_02540 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.874 |
page 1 of 2