STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC10883.1Signal peptidase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)    
Predicted Functional Partners:
A3D23_04395
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.900
OGC10884.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGC10885.1
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGC10888.1
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.720
OGC10886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.501
OGC10887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.501
OGC13508.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.451
OGC13226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.403
OGC10389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.403
OGC10881.1
RNA pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.402
Your Current Organism:
candidate division WOR1 bacterium RIFCSPHIGHO202FULL5326
NCBI taxonomy Id: 1802566
Other names: c. division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26, candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.