STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC10759.1Peptide deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
OGC10763.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
OGC12510.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.923
OGC12489.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.912
OGC10535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.900
OGC12894.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.898
OGC12500.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.897
OGC13871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.896
OGC13119.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.892
OGC13721.1
30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.892
OGC12516.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.882
Your Current Organism:
candidate division WOR1 bacterium RIFCSPHIGHO202FULL5326
NCBI taxonomy Id: 1802566
Other names: c. division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26, candidate division WOR-1 bacterium RIFCSPHIGHO2_02_FULL_53_26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.