STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC17107.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (314 aa)    
Predicted Functional Partners:
OGC18010.1
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.992
OGC17420.1
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.985
OGC17533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.943
OGC18236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.943
OGC17108.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.806
OGC18115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.792
OGC17106.1
tyrosine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
OGC17104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGC17105.1
3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OGC17281.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.718
Your Current Organism:
candidate division WOR1 bacterium RIFOXYA12FULL5229
NCBI taxonomy Id: 1802571
Other names: c. division WOR-1 bacterium RIFOXYA12_FULL_52_29, candidate division WOR-1 bacterium RIFOXYA12_FULL_52_29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.