STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC18517.1Tyrosine recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
OGC18048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGC17616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.685
OGC18050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.638
OGC18049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.636
OGC18516.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.631
OGC18045.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
OGC18515.1
Phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
OGC18046.1
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
OGC18047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.618
OGC18041.1
3-oxoacyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.610
Your Current Organism:
candidate division WOR1 bacterium RIFOXYA12FULL5229
NCBI taxonomy Id: 1802571
Other names: c. division WOR-1 bacterium RIFOXYA12_FULL_52_29, candidate division WOR-1 bacterium RIFOXYA12_FULL_52_29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.