STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC05924.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)    
Predicted Functional Partners:
OGC05916.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
OGC05919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
OGC05920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
OGC05922.1
V-type ATP synthase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGC05923.1
V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGC05917.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
OGC05660.1
ATP synthase F0 subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.990
OGC05663.1
F0F1 ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.836
OGC05666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.814
OGC05665.1
F0F1 ATP synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.805
Your Current Organism:
candidate division WOR1 bacterium RIFOXYA2FULL3621
NCBI taxonomy Id: 1802572
Other names: c. division WOR-1 bacterium RIFOXYA2_FULL_36_21, candidate division WOR-1 bacterium RIFOXYA2_FULL_36_21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.