STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY22712.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
OGY22691.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
OGY22690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.933
A2113_02250
Type I glyceraldehyde-3-phosphate dehydrogenase; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.900
OGY22713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.900
OGY21680.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.832
OGY22697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.787
OGY21697.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.784
OGY22693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGY22700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.743
pgk
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.
    
  0.676
Your Current Organism:
Woykebacteria bacterium GWA1448
NCBI taxonomy Id: 1802591
Other names: C. Woykebacteria bacterium GWA1_44_8, Candidatus Woykebacteria bacterium GWA1_44_8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.