STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGY21725.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (215 aa)    
Predicted Functional Partners:
OGY21721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.863
A2113_01380
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the AdoMet synthase family.
  
 
 0.853
serS
serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
  
    0.819
OGY21719.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.805
OGY21727.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
OGY21728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.634
uppP
Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.596
OGY21234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.584
lysS
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.581
OGY20953.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.476
Your Current Organism:
Woykebacteria bacterium GWA1448
NCBI taxonomy Id: 1802591
Other names: C. Woykebacteria bacterium GWA1_44_8, Candidatus Woykebacteria bacterium GWA1_44_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.