STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGC68867.1Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)    
Predicted Functional Partners:
OGC68866.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.998
OGC68863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.997
OGC68868.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.968
OGC69514.1
Phosphopyruvate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.959
OGC69981.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.950
OGC69783.1
glutamate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
OGC69944.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
OGC68994.1
prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
OGC68864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.918
OGC69945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.881
Your Current Organism:
candidate division WWE3 bacterium RIFOXYB1FULL4324
NCBI taxonomy Id: 1802640
Other names: c. division WWE3 bacterium RIFOXYB1_FULL_43_24, candidate division WWE3 bacterium RIFOXYB1_FULL_43_24
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.