STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE84960.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
A2190_05870
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.997
OHE84996.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OHE84802.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.983
OHE84961.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.972
OHE84803.1
Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.966
A2190_05520
Fis family transcriptional regulator; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.905
OHE83051.1
Anti-sigma F factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.886
OHE84037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.886
OHE84815.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.748
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
  
 
0.580
Your Current Organism:
Xanthomonadales bacterium RIFOXYA1FULL6910
NCBI taxonomy Id: 1802656
Other names: X. bacterium RIFOXYA1_FULL_69_10, Xanthomonadales bacterium RIFOXYA1_FULL_69_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.