STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE85035.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
OHE85034.1
AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
A2190_06215
Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
OHE84311.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
zipA
Chromosome segregation protein SMC; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.716
OHE85033.1
DnaA regulatory inactivator Hda; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family. HdA subfamily.
 
     0.715
OHE85883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
OHE85184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
OHE83759.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
OHE85885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.688
OHE83791.1
TIGR02099 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
Your Current Organism:
Xanthomonadales bacterium RIFOXYA1FULL6910
NCBI taxonomy Id: 1802656
Other names: X. bacterium RIFOXYA1_FULL_69_10, Xanthomonadales bacterium RIFOXYA1_FULL_69_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.