STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHE85519.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (245 aa)    
Predicted Functional Partners:
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.734
OHE85150.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.728
OHE84546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.711
xylB
Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.682
A2190_11120
Thiamine-phosphate kinase; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.675
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
    
 0.667
A2190_05560
Heat-shock protein; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.666
tdh
Dipeptidyl-peptidase 7; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
  
 
 0.660
OHE84180.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.655
OHE83402.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.629
Your Current Organism:
Xanthomonadales bacterium RIFOXYA1FULL6910
NCBI taxonomy Id: 1802656
Other names: X. bacterium RIFOXYA1_FULL_69_10, Xanthomonadales bacterium RIFOXYA1_FULL_69_10
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