STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGN11992.1Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology. (623 aa)    
Predicted Functional Partners:
OGN12097.1
50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGN11993.1
Nucleotide exchange factor GrpE; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.999
OGN10951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.999
OGN11147.1
Chaperonin GroL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
OGN12098.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.982
OGN12013.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.948
OGN12153.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.943
OGN10747.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.941
OGN12094.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.940
OGN12106.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
Your Current Organism:
Yanofskybacteria bacterium RIFCSPHIGHO202FULL4312
NCBI taxonomy Id: 1802678
Other names: C. Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_12, Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_43_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.