STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHA85186.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (348 aa)    
Predicted Functional Partners:
OHA84762.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.877
A2481_04340
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      0.859
OHA84437.1
tRNA guanosine(34) transglycosylase Tgt; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.818
OHA85187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.780
OHA85185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.687
OHA85184.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
OHA83628.1
Triose-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.482
OHA85532.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.471
Your Current Organism:
Yonathbacteria bacterium RIFOXYC2FULL479
NCBI taxonomy Id: 1802729
Other names: C. Yonathbacteria bacterium RIFOXYC2_FULL_47_9, Candidatus Yonathbacteria bacterium RIFOXYC2_FULL_47_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.