STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHA88116.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (318 aa)    
Predicted Functional Partners:
OHA88449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.990
OHA88775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.884
OHA88536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.846
OHA88827.1
Protein-export membrane protein SecD; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.834
OHA88211.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.798
glyA
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.798
OHA88115.1
50S ribosomal protein L9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.715
OHA89568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.682
OHA88041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.615
OHA89204.1
Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.587
Your Current Organism:
Zambryskibacteria bacterium RIFCSPHIGHO201FULL4327
NCBI taxonomy Id: 1802735
Other names: C. Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27, Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.