STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHA87974.1DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (823 aa)    
Predicted Functional Partners:
OHA89175.1
Negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
A2741_01370
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.660
OHA88681.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.657
OHA87976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.650
OHA89170.1
Transcription antitermination factor NusB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.648
OHA87975.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.646
OHA89041.1
Translation elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.637
OHA88686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.633
OHA88110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.627
OHA87972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.621
Your Current Organism:
Zambryskibacteria bacterium RIFCSPHIGHO201FULL4327
NCBI taxonomy Id: 1802735
Other names: C. Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27, Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.