STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OHA88776.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
OHA88047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.946
OHA88536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.854
OHA89638.1
tRNA 2-thiouridine(34) synthase MnmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.852
OHA88051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.820
OHA88815.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.806
OHA88204.1
ATP-dependent Clp protease proteolytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.771
OHA88159.1
Holliday junction DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.654
A2741_01370
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.607
OHA88775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.592
OHA89062.1
Nucleoside-diphosphate kinase; Catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.522
Your Current Organism:
Zambryskibacteria bacterium RIFCSPHIGHO201FULL4327
NCBI taxonomy Id: 1802735
Other names: C. Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27, Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_01_FULL_43_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.