STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY38869.1Pentachlorophenol 4-monooxygenase; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. (563 aa)    
Predicted Functional Partners:
EDY38311.1
[I] COG3000 Sterol desaturase.
   
 0.624
cyp
[Q] COG2124 Cytochrome P450.
  
 0.574
EDY39779.1
Monooxygenase, FAD-binding protein; [C] COG0644 Dehydrogenases (flavoproteins).
  
     0.552
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.541
EDY37259.1
[Q] COG2124 Cytochrome P450.
   
 0.519
EDY39576.1
Putative Rieske (2Fe-2S) family protein; [PR] COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
 
 0.514
EDY39096.1
YGGT family, putative; [S] COG0762 Predicted integral membrane protein.
       0.495
EDY39123.1
AMP-binding enzyme domain protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.453
EDY38347.1
Hypothetical protein; [H] COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; SAM binding motif.
    
  0.410
EDY38474.1
[QR] COG0500 SAM-dependent methyltransferases.
    
  0.410
Your Current Organism:
Cyanobium sp. PCC7001
NCBI taxonomy Id: 180281
Other names: Anacystis marina 6, C. sp. PCC 7001, Cyanobium sp. PCC 7001, Synechococcus sp. PCC 7001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.