STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY39067.1HAD-superfamily hydrolase subfamily IA, variant 3; [R] COG0637 Predicted phosphatase/phosphohexomutase. (213 aa)    
Predicted Functional Partners:
treS
Trehalose synthase/putative maltokinase; [G] COG0366 Glycosidases.
 
 
 0.843
EDY38360.1
Sucrose-phosphate synthase; [M] COG0438 Glycosyltransferase.
  
 
 0.743
EDY37345.1
Uma3; [R] COG0645 Predicted kinase.
  
    0.735
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.725
EDY38286.1
Competence-damaged protein; [R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
  0.703
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.689
EDY39423.1
Glycerol kinase; [G] COG1070 Sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
 
 
 0.553
EDY37687.1
Hypothetical protein.
       0.545
EDY39138.1
Haloacid dehalogenase, IA family protein; [R] COG1011 Predicted hydrolase (HAD superfamily).
   
 0.509
hprA
[HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.501
Your Current Organism:
Cyanobium sp. PCC7001
NCBI taxonomy Id: 180281
Other names: Anacystis marina 6, C. sp. PCC 7001, Cyanobium sp. PCC 7001, Synechococcus sp. PCC 7001
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