STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY39076.1MIP family channel protein; [G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family. (246 aa)    
Predicted Functional Partners:
EDY39423.1
Glycerol kinase; [G] COG1070 Sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
  
 
 0.920
EDY38357.1
Cyclic nucleotide-binding domain protein.
   
 
 0.899
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.828
EDY37469.1
[C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
    
 
 0.825
EDY37238.1
Mechanosensitive ion channel/cyclic nucleotide-binding domain protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
   
 0.799
EDY37325.1
Patatin; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
  0.740
cysR
Transcriptional regulator CRP family protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
    
  0.733
EDY38400.1
Cyclic nucleotide-binding domain protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
    
  0.733
EDY37279.1
ABC transporter, ATP-binding protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
    
 0.733
EDY39460.1
Cyclic nucleotide-binding domain protein; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
    
  0.733
Your Current Organism:
Cyanobium sp. PCC7001
NCBI taxonomy Id: 180281
Other names: Anacystis marina 6, C. sp. PCC 7001, Cyanobium sp. PCC 7001, Synechococcus sp. PCC 7001
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