STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY39744.1CotB mutant; [C] COG1413 FOG: HEAT repeat. (215 aa)    
Predicted Functional Partners:
EDY37670.1
Conserved hypothetical protein.
       0.773
EDY37849.1
Peptidase, M20D family protein; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
       0.773
EDY39688.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.770
EDY39164.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.768
EDY39494.1
Conserved hypothetical protein; [M] COG0859 ADP-heptose:LPS heptosyltransferase.
  
     0.768
EDY38427.1
OstA-like protein; [S] COG1934 Uncharacterized protein conserved in bacteria.
  
     0.763
EDY38607.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.760
EDY39383.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; repeats containing protein.
  
     0.758
EDY39315.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.755
cpcF
Phycocyanin alpha-subunit phycocyanobilin lyase; [C] COG1413 FOG: HEAT repeat.
  
     0.748
Your Current Organism:
Cyanobium sp. PCC7001
NCBI taxonomy Id: 180281
Other names: Anacystis marina 6, C. sp. PCC 7001, Cyanobium sp. PCC 7001, Synechococcus sp. PCC 7001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.