STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY37946.1[V] COG0286 Type I restriction-modification system methyltransferase subunit. (487 aa)    
Predicted Functional Partners:
hsdS
HsdS, type I site-specific deoxyribonuclease; [V] COG0732 Restriction endonuclease S subunits.
 
 
 0.998
EDY37381.1
Type I restriction-modification system, R subunit; [R] COG4889 Predicted helicase.
 
 
 0.985
EDY39772.1
[V] COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
 
 0.983
EDY38639.1
Hypothetical protein.
       0.773
EDY37815.1
Mrr restriction system protein; [V] COG1715 Restriction endonuclease.
 
  
 0.760
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
 
 0.703
EDY39649.1
Type III restriction enzyme, res subunit; [KL] COG1061 DNA or RNA helicases of superfamily II.
 
   
 0.524
kpsF
Polysialic acid capsule synthesis protein KpsF; [R] COG0517 FOG: CBS domain; Belongs to the SIS family. GutQ/KpsF subfamily.
   
 
 0.473
EDY38959.1
[K] COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP.
  
    0.455
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.441
Your Current Organism:
Cyanobium sp. PCC7001
NCBI taxonomy Id: 180281
Other names: Anacystis marina 6, C. sp. PCC 7001, Cyanobium sp. PCC 7001, Synechococcus sp. PCC 7001
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