Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000797495_01352 | GCA_000797495_05506 | GCA_000797495_01352 | GCA_000797495_05506 | Unannotated protein. | Unannotated protein; Belongs to the UPF0758 family. | 0.705 |
GCA_000797495_01352 | mreC | GCA_000797495_01352 | GCA_000797495_05508 | Unannotated protein. | Unannotated protein; Involved in formation and maintenance of cell shape. | 0.558 |
GCA_000797495_02043 | GCA_000797495_05506 | GCA_000797495_02043 | GCA_000797495_05506 | Unannotated protein. | Unannotated protein; Belongs to the UPF0758 family. | 0.761 |
GCA_000797495_02043 | mutL | GCA_000797495_02043 | GCA_000797495_05501 | Unannotated protein. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.589 |
GCA_000797495_02043 | mutS_1 | GCA_000797495_02043 | GCA_000797495_05500 | Unannotated protein. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.564 |
GCA_000797495_05506 | GCA_000797495_01352 | GCA_000797495_05506 | GCA_000797495_01352 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein. | 0.705 |
GCA_000797495_05506 | GCA_000797495_02043 | GCA_000797495_05506 | GCA_000797495_02043 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein. | 0.761 |
GCA_000797495_05506 | GCA_000797495_05509 | GCA_000797495_05506 | GCA_000797495_05509 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein. | 0.790 |
GCA_000797495_05506 | maf | GCA_000797495_05506 | GCA_000797495_04711 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.846 |
GCA_000797495_05506 | minC | GCA_000797495_05506 | GCA_000797495_05511 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.684 |
GCA_000797495_05506 | mreB_1 | GCA_000797495_05506 | GCA_000797495_05507 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein. | 0.856 |
GCA_000797495_05506 | mreC | GCA_000797495_05506 | GCA_000797495_05508 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein; Involved in formation and maintenance of cell shape. | 0.942 |
GCA_000797495_05506 | mutL | GCA_000797495_05506 | GCA_000797495_05501 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.812 |
GCA_000797495_05506 | mutS_1 | GCA_000797495_05506 | GCA_000797495_05500 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.782 |
GCA_000797495_05506 | pbpA_2 | GCA_000797495_05506 | GCA_000797495_05510 | Unannotated protein; Belongs to the UPF0758 family. | Unannotated protein. | 0.668 |
GCA_000797495_05509 | GCA_000797495_05506 | GCA_000797495_05509 | GCA_000797495_05506 | Unannotated protein. | Unannotated protein; Belongs to the UPF0758 family. | 0.790 |
GCA_000797495_05509 | maf | GCA_000797495_05509 | GCA_000797495_04711 | Unannotated protein. | Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.401 |
GCA_000797495_05509 | minC | GCA_000797495_05509 | GCA_000797495_05511 | Unannotated protein. | Unannotated protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.941 |
GCA_000797495_05509 | mreB_1 | GCA_000797495_05509 | GCA_000797495_05507 | Unannotated protein. | Unannotated protein. | 0.877 |
GCA_000797495_05509 | mreC | GCA_000797495_05509 | GCA_000797495_05508 | Unannotated protein. | Unannotated protein; Involved in formation and maintenance of cell shape. | 0.995 |
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