STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_721429Fumarylacetoacetase. (417 aa)    
Predicted Functional Partners:
C1646_282881
Glutathione S-transferase; Belongs to the GST superfamily.
 
 
 0.950
C1646_679708
Homogentisate 1,2-dioxygenase.
 
 
 0.914
C1646_663509
FAA_hydrolase domain-containing protein.
     
 0.861
C1646_702262
Fumarate hydratase.
  
 0.828
C1646_762754
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.811
C1646_744211
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.807
C1646_752953
FAA_hydrolase domain-containing protein.
     
 0.793
C1646_762542
Malate synthase; Belongs to the malate synthase family.
  
 
 0.786
C1646_623893
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.778
C1646_618884
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.771
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.