STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_672581TPR_REGION domain-containing protein. (967 aa)    
Predicted Functional Partners:
C1646_681971
Lysophospholipase.
     
 0.776
C1646_628637
Lecithin:cholesterol acyltransferase-domain-containing protein.
     
 0.554
C1646_719553
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
     
 0.532
C1646_671054
PlsC domain-containing protein.
     
 0.531
C1646_705804
Lysophospholipase 1.
    
  0.521
C1646_759539
Lysophospholipase.
     
 0.483
C1646_622284
Lipase_GDSL domain-containing protein.
     
 0.471
C1646_662565
Lipase_GDSL domain-containing protein.
     
 0.471
C1646_122968
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
     
 0.437
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
Server load: low (18%) [HD]