STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_762672Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
C1646_516065
Uncharacterized protein.
    
  0.480
C1646_799470
RPA_C domain-containing protein.
    
  0.440
C1646_698947
Uncharacterized protein.
    
  0.440
C1646_744218
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.438
C1646_766441
ERCC4 domain-containing protein.
    
  0.412
C1646_620277
Uncharacterized protein.
    
  0.412
C1646_356198
Uncharacterized protein.
    
  0.401
C1646_716416
Uncharacterized protein.
    
  0.401
C1646_195648
Uncharacterized protein.
    
  0.401
C1646_687417
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
  0.401
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
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