STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_814478GATA-type domain-containing protein. (132 aa)    
Predicted Functional Partners:
C1646_816041
Uncharacterized protein.
    
 0.614
C1646_814922
CENP-A-nucleosome distal centromere subunit, CENP-P-domain-containing protein.
    
 0.614
C1646_687683
Uncharacterized protein.
    
 0.609
C1646_659509
Histone H2A; Belongs to the histone H2A family.
    
 0.577
C1646_621466
Histone-fold-containing protein.
    
 
 0.564
C1646_693878
Ubiquitin carboxyl-terminal hydrolase.
    
  0.560
C1646_723386
TBP-domain-containing protein.
    
 0.551
C1646_718290
BTB domain-containing protein.
    
 0.551
C1646_500381
Uncharacterized protein.
    
  0.540
C1646_733299
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.534
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.