STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_759641Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
C1646_122968
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
  0.561
C1646_617452
60S ribosomal protein L21-A.
   
   0.558
C1646_619817
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.525
C1646_649337
Ribosomal protein L13-domain-containing protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.482
C1646_704433
Cytosolic 60S large ribosomal protein L39.
   
   0.478
C1646_687570
60S ribosomal protein L2.
   
 
 0.465
C1646_733118
Translation protein SH3-like domain-containing protein.
   
 
 0.447
C1646_618735
Translation protein SH3-like domain-containing protein.
   
 
 0.447
C1646_770672
tRNA synthetases class I, catalytic domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.435
C1646_621872
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.435
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.