STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_755604Endonuclease/exonuclease/phosphatase. (354 aa)    
Predicted Functional Partners:
C1646_682666
Glycosyl transferase family 21 protein.
     
 0.787
C1646_698220
Neutral ceramidase.
     
 0.780
C1646_753151
PAP2_C domain-containing protein.
     
 0.780
C1646_622480
Uncharacterized protein.
     
 0.707
C1646_174604
Uncharacterized protein.
     
 0.668
C1646_705303
Uncharacterized protein.
     
 0.668
C1646_625055
Uncharacterized protein.
     
 0.668
C1646_710317
WD40-repeat-containing domain protein.
     
 0.655
C1646_642132
Alkaline ceramidase.
    
 0.630
C1646_705441
Ceramidase.
    
 0.630
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.