STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1646_617511ELMO/CED-12 family-domain-containing protein. (733 aa)    
Predicted Functional Partners:
C1646_770141
Uncharacterized protein; Belongs to the DOCK family.
  
 
 0.997
C1646_820308
Ras-related C3 botulinium toxin substrate.
    
 0.862
C1646_711735
Ras-related C3 botulinium toxin substrate.
    
 0.862
C1646_704850
50S ribosomal protein L30e-like protein.
    
 0.862
C1646_624391
Cell division control protein 42.
    
 0.862
C1646_692850
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.862
C1646_483263
Small GTPase superfamily.
    
 0.804
C1646_720467
Small GTPase-binding protein.
    
 0.804
C1646_673981
Putative Rho GTPase Rho 2.
    
 0.804
C1646_702594
Rho type small GTPase.
    
 0.804
Your Current Organism:
Rhizophagus sp. MUCL43196
NCBI taxonomy Id: 1803374
Other names: R. sp. MUCL 43196, Rhizophagus sp. MUCL 43196, Rhizophagus sp. MUCL-43196
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