STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLB31398.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
OLB31395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.972
OLB25798.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.956
OLB32943.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.938
OLB28322.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.932
OLB29770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.923
OLB29056.1
tRNA pseudouridine(38-40) synthase TruA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.902
OLB27055.1
rRNA maturation RNase YbeY; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.902
OLB27966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.898
OLB28336.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.876
OLB29285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.874
Your Current Organism:
Acidobacteria bacterium 13220CM5827
NCBI taxonomy Id: 1803466
Other names: A. bacterium 13_2_20CM_58_27, Acidobacteria bacterium 13_2_20CM_58_27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.