STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKI20877.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
OKI20876.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.816
OKI20878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OKI20879.1
Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OKI20875.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.503
A6A07_06100
TetR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.437
OKI19897.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.437
OKI20874.1
Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
OKI30942.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.406
Your Current Organism:
Streptomyces sp. CB03911
NCBI taxonomy Id: 1804758
Other names: S. sp. CB03911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.