Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_01134 | JCGZ_02490 | A0A067KTA9 | A0A067JIK0 | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | PDZ domain-containing protein. | 0.585 |
JCGZ_01134 | JCGZ_09453 | A0A067KTA9 | A0A067KTY5 | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | PCI domain-containing protein. | 0.997 |
JCGZ_01134 | JCGZ_11347 | A0A067KTA9 | A0A067K415 | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | PCI domain-containing protein. | 0.992 |
JCGZ_01134 | JCGZ_18844 | A0A067KTA9 | A0A067K0L9 | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | PCI domain-containing protein. | 0.991 |
JCGZ_01134 | JCGZ_19177 | A0A067KTA9 | A0A067LI93 | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | RPN13_C domain-containing protein. | 0.990 |
JCGZ_01134 | JCGZ_25741 | A0A067KTA9 | A0A067JX19 | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.998 |
JCGZ_02490 | JCGZ_01134 | A0A067JIK0 | A0A067KTA9 | PDZ domain-containing protein. | 26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.585 |
JCGZ_02490 | JCGZ_03980 | A0A067JIK0 | A0A067KR58 | PDZ domain-containing protein. | Uncharacterized protein. | 0.525 |
JCGZ_02490 | JCGZ_04859 | A0A067JIK0 | A0A067KPW0 | PDZ domain-containing protein. | UBX domain-containing protein. | 0.572 |
JCGZ_02490 | JCGZ_08211 | A0A067JIK0 | A0A067KXB9 | PDZ domain-containing protein. | Uncharacterized protein. | 0.585 |
JCGZ_02490 | JCGZ_09453 | A0A067JIK0 | A0A067KTY5 | PDZ domain-containing protein. | PCI domain-containing protein. | 0.604 |
JCGZ_02490 | JCGZ_11347 | A0A067JIK0 | A0A067K415 | PDZ domain-containing protein. | PCI domain-containing protein. | 0.525 |
JCGZ_02490 | JCGZ_12351 | A0A067JIK0 | A0A067KHZ4 | PDZ domain-containing protein. | Ribosomal_TL5_C domain-containing protein. | 0.538 |
JCGZ_02490 | JCGZ_18844 | A0A067JIK0 | A0A067K0L9 | PDZ domain-containing protein. | PCI domain-containing protein. | 0.513 |
JCGZ_02490 | JCGZ_19177 | A0A067JIK0 | A0A067LI93 | PDZ domain-containing protein. | RPN13_C domain-containing protein. | 0.536 |
JCGZ_02490 | JCGZ_25741 | A0A067JIK0 | A0A067JX19 | PDZ domain-containing protein. | 26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.566 |
JCGZ_03980 | JCGZ_02490 | A0A067KR58 | A0A067JIK0 | Uncharacterized protein. | PDZ domain-containing protein. | 0.525 |
JCGZ_03980 | JCGZ_12351 | A0A067KR58 | A0A067KHZ4 | Uncharacterized protein. | Ribosomal_TL5_C domain-containing protein. | 0.999 |
JCGZ_04859 | JCGZ_02490 | A0A067KPW0 | A0A067JIK0 | UBX domain-containing protein. | PDZ domain-containing protein. | 0.572 |
JCGZ_04859 | JCGZ_18844 | A0A067KPW0 | A0A067K0L9 | UBX domain-containing protein. | PCI domain-containing protein. | 0.750 |
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