STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCGZ_17575Pectate lyase. (442 aa)    
Predicted Functional Partners:
JCGZ_19275
Uncharacterized protein.
     
 0.750
JCGZ_19407
Uncharacterized protein.
     
 0.746
JCGZ_06154
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
     
 0.699
JCGZ_16769
Uncharacterized protein.
     
 0.688
JCGZ_07358
Pectinesterase.
   
 
 0.684
JCGZ_19274
Uncharacterized protein.
     
 0.678
JCGZ_19276
Uncharacterized protein.
     
 0.677
JCGZ_13538
Uncharacterized protein.
     
 0.677
JCGZ_13539
Uncharacterized protein.
     
 0.677
JCGZ_19278
Uncharacterized protein.
     
 0.677
Your Current Organism:
Jatropha curcas
NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.