Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_01927 | JCGZ_07087 | A0A067JIU1 | A0A067KBB3 | Uncharacterized protein. | Chorismate mutase. | 0.793 |
JCGZ_01927 | JCGZ_09404 | A0A067JIU1 | A0A067KSL7 | Uncharacterized protein. | Uncharacterized protein. | 0.903 |
JCGZ_01927 | JCGZ_14539 | A0A067JIU1 | A0A067K174 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.952 |
JCGZ_01927 | JCGZ_18547 | A0A067JIU1 | A0A067LK74 | Uncharacterized protein. | Chorismate synthase. | 0.664 |
JCGZ_01927 | JCGZ_23417 | A0A067JIU1 | A0A067JVM6 | Uncharacterized protein. | Uncharacterized protein. | 0.952 |
JCGZ_01927 | JCGZ_25385 | A0A067JIU1 | A0A067JJD2 | Uncharacterized protein. | DHQ_synthase domain-containing protein. | 0.651 |
JCGZ_01927 | JCGZ_26783 | A0A067JIU1 | A0A067LBA7 | Uncharacterized protein. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.827 |
JCGZ_03503 | JCGZ_07087 | A0A067KUZ2 | A0A067KBB3 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Chorismate mutase. | 0.592 |
JCGZ_03503 | JCGZ_14539 | A0A067KUZ2 | A0A067K174 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.479 |
JCGZ_03503 | JCGZ_15815 | A0A067KUZ2 | A0A067L2E8 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.901 |
JCGZ_03503 | JCGZ_18650 | A0A067KUZ2 | A0A067KBW7 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.901 |
JCGZ_03503 | JCGZ_23417 | A0A067KUZ2 | A0A067JVM6 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | Uncharacterized protein. | 0.703 |
JCGZ_03503 | JCGZ_25385 | A0A067KUZ2 | A0A067JJD2 | Phospho-2-dehydro-3-deoxyheptonate aldolase. | DHQ_synthase domain-containing protein. | 0.955 |
JCGZ_07087 | JCGZ_01927 | A0A067KBB3 | A0A067JIU1 | Chorismate mutase. | Uncharacterized protein. | 0.793 |
JCGZ_07087 | JCGZ_03503 | A0A067KBB3 | A0A067KUZ2 | Chorismate mutase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.592 |
JCGZ_07087 | JCGZ_09404 | A0A067KBB3 | A0A067KSL7 | Chorismate mutase. | Uncharacterized protein. | 0.829 |
JCGZ_07087 | JCGZ_14539 | A0A067KBB3 | A0A067K174 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.688 |
JCGZ_07087 | JCGZ_18547 | A0A067KBB3 | A0A067LK74 | Chorismate mutase. | Chorismate synthase. | 0.991 |
JCGZ_07087 | JCGZ_23417 | A0A067KBB3 | A0A067JVM6 | Chorismate mutase. | Uncharacterized protein. | 0.690 |
JCGZ_07087 | JCGZ_25385 | A0A067KBB3 | A0A067JJD2 | Chorismate mutase. | DHQ_synthase domain-containing protein. | 0.750 |
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