STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCGZ_25410Uncharacterized protein. (878 aa)    
Predicted Functional Partners:
JCGZ_05724
Sas10 domain-containing protein.
   
  0.987
JCGZ_15907
Uncharacterized protein.
   
 0.976
JCGZ_00843
NUC153 domain-containing protein.
   
 
 0.953
JCGZ_20196
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.918
JCGZ_25348
WD_REPEATS_REGION domain-containing protein.
   
 0.917
JCGZ_00215
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.914
JCGZ_03044
Uncharacterized protein.
   
 0.903
JCGZ_09682
Uncharacterized protein.
   
 0.891
JCGZ_22606
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.847
JCGZ_13944
Uncharacterized protein.
   
 0.843
Your Current Organism:
Jatropha curcas
NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.