JCGZ_22654 protein (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

JCGZ_22654

AAA domain-containing protein. (655 aa)

Predicted Functional Partners:

JCGZ_24655

0.754

JCGZ_25723

0.542

JCGZ_02557

0.496

JCGZ_10176

0.466

JCGZ_10177

0.466

JCGZ_13908

0.440

JCGZ_18131

0.429

JCGZ_03473

0.429

JCGZ_17690

0.419

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02557	JCGZ_22654	A0A067KTP9	A0A067K005	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	AAA domain-containing protein.	0.496
JCGZ_03473	JCGZ_22654	A0A067KUW2	A0A067K005	Uncharacterized protein; Belongs to the BI1 family.	AAA domain-containing protein.	0.429
JCGZ_03473	JCGZ_25723	A0A067KUW2	A0A067JJB9	Uncharacterized protein; Belongs to the BI1 family.	Prohibitin.	0.557
JCGZ_10176	JCGZ_13908	A0A067LCY0	A0A067JW57	Prohibitin.	Uncharacterized protein.	0.443
JCGZ_10176	JCGZ_22654	A0A067LCY0	A0A067K005	Prohibitin.	AAA domain-containing protein.	0.466
JCGZ_10176	JCGZ_25723	A0A067LCY0	A0A067JJB9	Prohibitin.	Prohibitin.	0.998
JCGZ_10177	JCGZ_13908	A0A067LD76	A0A067JW57	Prohibitin.	Uncharacterized protein.	0.443
JCGZ_10177	JCGZ_22654	A0A067LD76	A0A067K005	Prohibitin.	AAA domain-containing protein.	0.466
JCGZ_10177	JCGZ_25723	A0A067LD76	A0A067JJB9	Prohibitin.	Prohibitin.	0.998
JCGZ_13908	JCGZ_10176	A0A067JW57	A0A067LCY0	Uncharacterized protein.	Prohibitin.	0.443
JCGZ_13908	JCGZ_10177	A0A067JW57	A0A067LD76	Uncharacterized protein.	Prohibitin.	0.443
JCGZ_13908	JCGZ_22654	A0A067JW57	A0A067K005	Uncharacterized protein.	AAA domain-containing protein.	0.440
JCGZ_13908	JCGZ_25723	A0A067JW57	A0A067JJB9	Uncharacterized protein.	Prohibitin.	0.571
JCGZ_17690	JCGZ_22654	A0A067JRL5	A0A067K005	Tim44 domain-containing protein.	AAA domain-containing protein.	0.419
JCGZ_17690	JCGZ_25723	A0A067JRL5	A0A067JJB9	Tim44 domain-containing protein.	Prohibitin.	0.484
JCGZ_18131	JCGZ_22654	A0A067K1P3	A0A067K005	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	AAA domain-containing protein.	0.429
JCGZ_22654	JCGZ_02557	A0A067K005	A0A067KTP9	AAA domain-containing protein.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.496
JCGZ_22654	JCGZ_03473	A0A067K005	A0A067KUW2	AAA domain-containing protein.	Uncharacterized protein; Belongs to the BI1 family.	0.429
JCGZ_22654	JCGZ_10176	A0A067K005	A0A067LCY0	AAA domain-containing protein.	Prohibitin.	0.466
JCGZ_22654	JCGZ_10177	A0A067K005	A0A067LD76	AAA domain-containing protein.	Prohibitin.	0.466