Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_02601 | JCGZ_02602 | A0A067KTN1 | A0A067KTU5 | Uncharacterized protein. | Uncharacterized protein. | 0.830 |
JCGZ_02601 | JCGZ_14826 | A0A067KTN1 | A0A067K5U9 | Uncharacterized protein. | Uncharacterized protein. | 0.641 |
JCGZ_02602 | JCGZ_02601 | A0A067KTU5 | A0A067KTN1 | Uncharacterized protein. | Uncharacterized protein. | 0.830 |
JCGZ_02602 | JCGZ_14826 | A0A067KTU5 | A0A067K5U9 | Uncharacterized protein. | Uncharacterized protein. | 0.641 |
JCGZ_03048 | JCGZ_04743 | A0A067JPG8 | A0A067L0T7 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Uncharacterized protein. | 0.987 |
JCGZ_03048 | JCGZ_14826 | A0A067JPG8 | A0A067K5U9 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Uncharacterized protein. | 0.535 |
JCGZ_03048 | JCGZ_23498 | A0A067JPG8 | A0A067JUK7 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.994 |
JCGZ_03048 | JCGZ_24822 | A0A067JPG8 | A0A067L0T1 | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | Uncharacterized protein. | 0.995 |
JCGZ_04743 | JCGZ_03048 | A0A067L0T7 | A0A067JPG8 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.987 |
JCGZ_04743 | JCGZ_14826 | A0A067L0T7 | A0A067K5U9 | Uncharacterized protein. | Uncharacterized protein. | 0.628 |
JCGZ_04743 | JCGZ_23498 | A0A067L0T7 | A0A067JUK7 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.993 |
JCGZ_04743 | JCGZ_24822 | A0A067L0T7 | A0A067L0T1 | Uncharacterized protein. | Uncharacterized protein. | 0.990 |
JCGZ_04758 | JCGZ_13324 | A0A067L0V0 | A0A067KKQ7 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
JCGZ_04758 | JCGZ_14826 | A0A067L0V0 | A0A067K5U9 | Uncharacterized protein. | Uncharacterized protein. | 0.544 |
JCGZ_04758 | JCGZ_17945 | A0A067L0V0 | A0A067JSD8 | Uncharacterized protein. | Nup54 domain-containing protein. | 0.992 |
JCGZ_04758 | JCGZ_27006 | A0A067L0V0 | A0A067L413 | Uncharacterized protein. | Nuclear pore protein. | 0.995 |
JCGZ_13324 | JCGZ_04758 | A0A067KKQ7 | A0A067L0V0 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
JCGZ_13324 | JCGZ_14826 | A0A067KKQ7 | A0A067K5U9 | Uncharacterized protein. | Uncharacterized protein. | 0.554 |
JCGZ_13324 | JCGZ_17945 | A0A067KKQ7 | A0A067JSD8 | Uncharacterized protein. | Nup54 domain-containing protein. | 0.992 |
JCGZ_13324 | JCGZ_27006 | A0A067KKQ7 | A0A067L413 | Uncharacterized protein. | Nuclear pore protein. | 0.999 |
page 1 of 3