Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GRAS07 | JCGZ_04659 | A0A067LCG6 | A0A067KP61 | GRAS07 protein; Belongs to the GRAS family. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.470 |
GRAS07 | JCGZ_10200 | A0A067LCG6 | A0A067LND8 | GRAS07 protein; Belongs to the GRAS family. | AvrRpt-cleavage domain-containing protein. | 0.452 |
GRAS07 | JCGZ_15716 | A0A067LCG6 | A0A067LB38 | GRAS07 protein; Belongs to the GRAS family. | Uncharacterized protein. | 0.450 |
GRAS07 | JCGZ_18636 | A0A067LCG6 | A0A067K0H4 | GRAS07 protein; Belongs to the GRAS family. | Uncharacterized protein. | 0.447 |
GRAS07 | JCGZ_20939 | A0A067LCG6 | A0A067K682 | GRAS07 protein; Belongs to the GRAS family. | Lectin_legB domain-containing protein; Belongs to the leguminous lectin family. | 0.491 |
GRAS07 | JCGZ_23372 | A0A067LCG6 | A0A067JVH6 | GRAS07 protein; Belongs to the GRAS family. | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | 0.419 |
GRAS07 | JCGZ_24912 | A0A067LCG6 | A0A067L101 | GRAS07 protein; Belongs to the GRAS family. | Uncharacterized protein. | 0.463 |
GRAS07 | JCGZ_25734 | A0A067LCG6 | R4NEY5 | GRAS07 protein; Belongs to the GRAS family. | NAC transcription factor 095. | 0.425 |
GRAS07 | JCGZ_25973 | A0A067LCG6 | A0A067JE93 | GRAS07 protein; Belongs to the GRAS family. | BURP domain-containing protein. | 0.465 |
JCGZ_02056 | JCGZ_04659 | A0A067KYJ3 | A0A067KP61 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.425 |
JCGZ_02056 | JCGZ_18636 | A0A067KYJ3 | A0A067K0H4 | Uncharacterized protein. | Uncharacterized protein. | 0.526 |
JCGZ_02056 | JCGZ_20939 | A0A067KYJ3 | A0A067K682 | Uncharacterized protein. | Lectin_legB domain-containing protein; Belongs to the leguminous lectin family. | 0.494 |
JCGZ_02056 | JCGZ_23372 | A0A067KYJ3 | A0A067JVH6 | Uncharacterized protein. | Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. | 0.515 |
JCGZ_02056 | JCGZ_24912 | A0A067KYJ3 | A0A067L101 | Uncharacterized protein. | Uncharacterized protein. | 0.502 |
JCGZ_04659 | GRAS07 | A0A067KP61 | A0A067LCG6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | GRAS07 protein; Belongs to the GRAS family. | 0.470 |
JCGZ_04659 | JCGZ_02056 | A0A067KP61 | A0A067KYJ3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.425 |
JCGZ_04659 | JCGZ_10200 | A0A067KP61 | A0A067LND8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | AvrRpt-cleavage domain-containing protein. | 0.489 |
JCGZ_04659 | JCGZ_18636 | A0A067KP61 | A0A067K0H4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.478 |
JCGZ_04659 | JCGZ_20939 | A0A067KP61 | A0A067K682 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Lectin_legB domain-containing protein; Belongs to the leguminous lectin family. | 0.492 |
JCGZ_04659 | JCGZ_24912 | A0A067KP61 | A0A067L101 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.411 |
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