Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_05724 | JCGZ_06122 | A0A067L795 | A0A067KLE2 | Sas10 domain-containing protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.999 |
JCGZ_05724 | JCGZ_06731 | A0A067L795 | A0A067L159 | Sas10 domain-containing protein. | Uncharacterized protein. | 0.990 |
JCGZ_05724 | JCGZ_08356 | A0A067L795 | A0A067KXL4 | Sas10 domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.992 |
JCGZ_05724 | JCGZ_08980 | A0A067L795 | A0A067KHD3 | Sas10 domain-containing protein. | CBF domain-containing protein. | 0.994 |
JCGZ_05724 | JCGZ_09154 | A0A067L795 | A0A067KF63 | Sas10 domain-containing protein. | FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. | 0.430 |
JCGZ_05724 | JCGZ_10347 | A0A067L795 | A0A067KK46 | Sas10 domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
JCGZ_05724 | JCGZ_13944 | A0A067L795 | A0A067JZF3 | Sas10 domain-containing protein. | Uncharacterized protein. | 0.999 |
JCGZ_05724 | JCGZ_20196 | A0A067L795 | A0A067JU06 | Sas10 domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.998 |
JCGZ_05724 | JCGZ_25348 | A0A067L795 | A0A067JVD7 | Sas10 domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
JCGZ_06122 | JCGZ_05724 | A0A067KLE2 | A0A067L795 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Sas10 domain-containing protein. | 0.999 |
JCGZ_06122 | JCGZ_06731 | A0A067KLE2 | A0A067L159 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Uncharacterized protein. | 0.993 |
JCGZ_06122 | JCGZ_08356 | A0A067KLE2 | A0A067KXL4 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
JCGZ_06122 | JCGZ_08980 | A0A067KLE2 | A0A067KHD3 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | CBF domain-containing protein. | 0.992 |
JCGZ_06122 | JCGZ_09154 | A0A067KLE2 | A0A067KF63 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. | 0.432 |
JCGZ_06122 | JCGZ_10347 | A0A067KLE2 | A0A067KK46 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
JCGZ_06122 | JCGZ_13944 | A0A067KLE2 | A0A067JZF3 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Uncharacterized protein. | 0.997 |
JCGZ_06122 | JCGZ_20196 | A0A067KLE2 | A0A067JU06 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
JCGZ_06122 | JCGZ_25348 | A0A067KLE2 | A0A067JVD7 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
JCGZ_06731 | JCGZ_05724 | A0A067L159 | A0A067L795 | Uncharacterized protein. | Sas10 domain-containing protein. | 0.990 |
JCGZ_06731 | JCGZ_06122 | A0A067L159 | A0A067KLE2 | Uncharacterized protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.993 |
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