Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_00215 | JCGZ_00454 | A0A067L5A8 | A0A067JG99 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Peptidase_M24 domain-containing protein. | 0.938 |
JCGZ_00215 | JCGZ_00458 | A0A067L5A8 | A0A067JG24 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Uncharacterized protein. | 0.938 |
JCGZ_00215 | JCGZ_06568 | A0A067L5A8 | A0A067LPI2 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.995 |
JCGZ_00215 | JCGZ_08764 | A0A067L5A8 | A0A067KV24 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Ipi1_N domain-containing protein. | 0.876 |
JCGZ_00215 | JCGZ_09062 | A0A067L5A8 | A0A067KUV1 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.999 |
JCGZ_00215 | JCGZ_10263 | A0A067L5A8 | A0A067LGE4 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
JCGZ_00215 | JCGZ_11315 | A0A067L5A8 | A0A067KGH1 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | WD_REPEATS_REGION domain-containing protein. | 0.893 |
JCGZ_00215 | JCGZ_11550 | A0A067L5A8 | A0A067KH75 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | CLP1_P domain-containing protein. | 0.881 |
JCGZ_00215 | JCGZ_17866 | A0A067L5A8 | A0A067JVA5 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.798 |
JCGZ_00454 | JCGZ_00215 | A0A067JG99 | A0A067L5A8 | Peptidase_M24 domain-containing protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.938 |
JCGZ_00454 | JCGZ_06568 | A0A067JG99 | A0A067LPI2 | Peptidase_M24 domain-containing protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.985 |
JCGZ_00454 | JCGZ_08764 | A0A067JG99 | A0A067KV24 | Peptidase_M24 domain-containing protein. | Ipi1_N domain-containing protein. | 0.846 |
JCGZ_00454 | JCGZ_09062 | A0A067JG99 | A0A067KUV1 | Peptidase_M24 domain-containing protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.863 |
JCGZ_00454 | JCGZ_10263 | A0A067JG99 | A0A067LGE4 | Peptidase_M24 domain-containing protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.986 |
JCGZ_00454 | JCGZ_11315 | A0A067JG99 | A0A067KGH1 | Peptidase_M24 domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.869 |
JCGZ_00454 | JCGZ_17866 | A0A067JG99 | A0A067JVA5 | Peptidase_M24 domain-containing protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.958 |
JCGZ_00458 | JCGZ_00215 | A0A067JG24 | A0A067L5A8 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.938 |
JCGZ_00458 | JCGZ_06568 | A0A067JG24 | A0A067LPI2 | Uncharacterized protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.985 |
JCGZ_00458 | JCGZ_08764 | A0A067JG24 | A0A067KV24 | Uncharacterized protein. | Ipi1_N domain-containing protein. | 0.846 |
JCGZ_00458 | JCGZ_09062 | A0A067JG24 | A0A067KUV1 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.863 |
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