STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCGZ_09988Ribosomal_L30 domain-containing protein. (107 aa)    
Predicted Functional Partners:
JCGZ_21444
Uncharacterized protein.
   
   0.889
JCGZ_18047
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.886
JCGZ_03616
Ribosomal_L18e/L15P domain-containing protein.
    
   0.884
JCGZ_10363
Uncharacterized protein.
   
   0.883
JCGZ_21171
Uncharacterized protein.
    
   0.875
JCGZ_24007
Uncharacterized protein.
   
   0.846
JCGZ_22243
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.846
JCGZ_02001
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
   0.841
JCGZ_21895
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
    
   0.839
JCGZ_11396
Uncharacterized protein.
    
   0.839
Your Current Organism:
Jatropha curcas
NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.
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