Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_02174 | JCGZ_07458 | A0A067KVE0 | A0A067KCM0 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Uncharacterized protein. | 0.836 |
JCGZ_02174 | JCGZ_08159 | A0A067KVE0 | A0A067KPD8 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | 0.490 |
JCGZ_02174 | JCGZ_08598 | A0A067KVE0 | A0A067KN74 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Cytochrome c domain-containing protein. | 0.429 |
JCGZ_02174 | JCGZ_11688 | A0A067KVE0 | A0A067K5C2 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.617 |
JCGZ_02174 | JCGZ_16944 | A0A067KVE0 | A0A067K361 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.400 |
JCGZ_07458 | JCGZ_02174 | A0A067KCM0 | A0A067KVE0 | Uncharacterized protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.836 |
JCGZ_07458 | JCGZ_08159 | A0A067KCM0 | A0A067KPD8 | Uncharacterized protein. | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | 0.951 |
JCGZ_07458 | JCGZ_08598 | A0A067KCM0 | A0A067KN74 | Uncharacterized protein. | Cytochrome c domain-containing protein. | 0.431 |
JCGZ_07458 | JCGZ_11688 | A0A067KCM0 | A0A067K5C2 | Uncharacterized protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.593 |
JCGZ_07458 | JCGZ_16944 | A0A067KCM0 | A0A067K361 | Uncharacterized protein. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.864 |
JCGZ_08159 | JCGZ_02174 | A0A067KPD8 | A0A067KVE0 | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.490 |
JCGZ_08159 | JCGZ_07458 | A0A067KPD8 | A0A067KCM0 | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | Uncharacterized protein. | 0.951 |
JCGZ_08159 | JCGZ_08598 | A0A067KPD8 | A0A067KN74 | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | Cytochrome c domain-containing protein. | 0.432 |
JCGZ_08159 | JCGZ_16944 | A0A067KPD8 | A0A067K361 | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.477 |
JCGZ_08598 | JCGZ_02174 | A0A067KN74 | A0A067KVE0 | Cytochrome c domain-containing protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.429 |
JCGZ_08598 | JCGZ_07458 | A0A067KN74 | A0A067KCM0 | Cytochrome c domain-containing protein. | Uncharacterized protein. | 0.431 |
JCGZ_08598 | JCGZ_08159 | A0A067KN74 | A0A067KPD8 | Cytochrome c domain-containing protein. | Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family. | 0.432 |
JCGZ_08598 | JCGZ_11688 | A0A067KN74 | A0A067K5C2 | Cytochrome c domain-containing protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.429 |
JCGZ_08598 | JCGZ_16944 | A0A067KN74 | A0A067K361 | Cytochrome c domain-containing protein. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.459 |
JCGZ_11688 | JCGZ_02174 | A0A067K5C2 | A0A067KVE0 | Uncharacterized protein; Belongs to the complex I LYR family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.617 |
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