Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_06314 | JCGZ_06502 | A0A067KQM0 | A0A067LQA6 | 4HBT domain-containing protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.454 |
JCGZ_06314 | JCGZ_15334 | A0A067KQM0 | A0A067LM70 | 4HBT domain-containing protein. | Aldolase_II domain-containing protein. | 0.543 |
JCGZ_06314 | JCGZ_17355 | A0A067KQM0 | A0A067LEW8 | 4HBT domain-containing protein. | PKS_AT domain-containing protein. | 0.446 |
JCGZ_06314 | JCGZ_24918 | A0A067KQM0 | A0A067L9X5 | 4HBT domain-containing protein. | Uncharacterized protein. | 0.600 |
JCGZ_06502 | JCGZ_06314 | A0A067LQA6 | A0A067KQM0 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 4HBT domain-containing protein. | 0.454 |
JCGZ_15334 | JCGZ_06314 | A0A067LM70 | A0A067KQM0 | Aldolase_II domain-containing protein. | 4HBT domain-containing protein. | 0.543 |
JCGZ_17355 | JCGZ_06314 | A0A067LEW8 | A0A067KQM0 | PKS_AT domain-containing protein. | 4HBT domain-containing protein. | 0.446 |
JCGZ_24918 | JCGZ_06314 | A0A067L9X5 | A0A067KQM0 | Uncharacterized protein. | 4HBT domain-containing protein. | 0.600 |