Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_01146 | JCGZ_08843 | A0A067JUA3 | A0A067KWL4 | DUF4005 domain-containing protein. | TIR domain-containing protein. | 0.467 |
JCGZ_06602 | JCGZ_08843 | A0A067LC78 | A0A067KWL4 | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | TIR domain-containing protein. | 0.432 |
JCGZ_06633 | JCGZ_08843 | A0A067LCJ1 | A0A067KWL4 | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | TIR domain-containing protein. | 0.447 |
JCGZ_06633 | JCGZ_25276 | A0A067LCJ1 | A0A067LEZ8 | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | Uncharacterized protein. | 0.409 |
JCGZ_08843 | JCGZ_01146 | A0A067KWL4 | A0A067JUA3 | TIR domain-containing protein. | DUF4005 domain-containing protein. | 0.467 |
JCGZ_08843 | JCGZ_06602 | A0A067KWL4 | A0A067LC78 | TIR domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.432 |
JCGZ_08843 | JCGZ_06633 | A0A067KWL4 | A0A067LCJ1 | TIR domain-containing protein. | Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. | 0.447 |
JCGZ_08843 | JCGZ_09655 | A0A067KWL4 | A0A067LAB8 | TIR domain-containing protein. | Uncharacterized protein. | 0.437 |
JCGZ_08843 | JCGZ_14576 | A0A067KWL4 | A0A067K958 | TIR domain-containing protein. | BHLH domain-containing protein. | 0.481 |
JCGZ_08843 | JCGZ_23367 | A0A067KWL4 | A0A067JVH1 | TIR domain-containing protein. | SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. | 0.437 |
JCGZ_08843 | JCGZ_25276 | A0A067KWL4 | A0A067LEZ8 | TIR domain-containing protein. | Uncharacterized protein. | 0.422 |
JCGZ_08843 | JCGZ_26431 | A0A067KWL4 | A0A067JRI5 | TIR domain-containing protein. | F-box domain-containing protein. | 0.442 |
JCGZ_08843 | JCGZ_26432 | A0A067KWL4 | A0A067JFB0 | TIR domain-containing protein. | Uncharacterized protein. | 0.437 |
JCGZ_09655 | JCGZ_08843 | A0A067LAB8 | A0A067KWL4 | Uncharacterized protein. | TIR domain-containing protein. | 0.437 |
JCGZ_09655 | JCGZ_14576 | A0A067LAB8 | A0A067K958 | Uncharacterized protein. | BHLH domain-containing protein. | 0.401 |
JCGZ_09655 | JCGZ_25276 | A0A067LAB8 | A0A067LEZ8 | Uncharacterized protein. | Uncharacterized protein. | 0.513 |
JCGZ_09655 | JCGZ_26431 | A0A067LAB8 | A0A067JRI5 | Uncharacterized protein. | F-box domain-containing protein. | 0.449 |
JCGZ_09655 | JCGZ_26432 | A0A067LAB8 | A0A067JFB0 | Uncharacterized protein. | Uncharacterized protein. | 0.425 |
JCGZ_14576 | JCGZ_08843 | A0A067K958 | A0A067KWL4 | BHLH domain-containing protein. | TIR domain-containing protein. | 0.481 |
JCGZ_14576 | JCGZ_09655 | A0A067K958 | A0A067LAB8 | BHLH domain-containing protein. | Uncharacterized protein. | 0.401 |
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